ATACseq
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- DNA packaging
- Various types of enzymes that cut DNA
- DNase I hypersensitive sites (DHSs)
- DNase profiling
- ENCODE
- DHS and ChIP-Seq
- Mapping enhancer-to-promoter
- Limitations of DNase-Seq & friends
- Tn5 Transposase & ATAC-seq
- Size distribution distinguishes nucleosome free from spanning
- Transcription start sites (TSS)
- TF fottprinting
- scATAC-seq
- scATAC-seq of HSPCs
  
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