Gene regulatory networks

• Guest speaker Emily Su

• Intro to Gene regulatory networks (GRN)

• Sampling of methods to infer GRNs from expression data

• single cell data

• SCENIC (Aibar et al Nat Methods 2017)

• Benchmarking methods with BEELINE (Pratapa et al Nat Methods 2020)

• Reconstructing dynamic networks with Epoch (Su et al Stem Cell Reports 2021)

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