Simulators

• Guest Speaker Dan Peng

• Background on transcriptional regulation

• Hill’s equation

• Activation

• Repression

• Loops

• Mutual inhibition

• Single-cell Simulators

  • BoolODE (Beeline Pratapa et al 2020)

  • Dyngen (Cannoodt et al 2021)

  • SERGIO (Dibaeina et al 2020)

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